Cytogenetics

BORN ID	Data Element Name	Encounter
CYTO001	Date of Sample	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Date the cytogenetics sample was obtained for testing Pick List Value:
CYTO002	Accession number or specimen number	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Unique identifier - to differentiate between twins, repeat samples, etc. Pick List Value:
CYTO003	Tissue Type	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Type of specimen sent for cytogenetic analysis Pick List Value: Tissue - other Cystic Hygroma Fluid Cultured Amniocytes Skin Cultured cells Cultured CVS Blood - Fetal Cordocentesis Ascitic Fluid Amniotic Fluid Blood Other Products of Conception Chorionic Villus Sampling (CVS) Placenta DNA extracted Blood - Umbilical Cord
CYTO005	Lab ID	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Lab ID Pick List Value:
CYTO006	QF-PCR Normal/Abnormal	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: QF-PCR Normal/Abnormal Pick List Value: Not Done Other Normal Uninterpretable Abnormal Abnormal, Pathogenic
CYTO007	QF-PCR Nomenclature Results	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: QF-PCR Nomenclature Results Pick List Value:
CYTO008	QF-PCR Text Results	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: QF-PCR Text Results Pick List Value:
CYTO009	Date of QF-PCR report	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Date of QF-PCR report Pick List Value:
CYTO010	Karyotype Normal/Abnormal	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Karyotype Normal/Abnormal Pick List Value: Uninterpretable Not Done Normal Abnormal Other Abnormal, Pathogenic
CYTO011	Karyotype Nomenclature Results	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Karyotype Nomenclature Results Pick List Value:
CYTO012	Karyotype Text Results	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Karyotype Text Results Pick List Value:
CYTO013	Date of karyotype report	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Date of karyotype report Pick List Value:
CYTO014	FISH Normal/Abnormal	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: FISH Normal/Abnormal Pick List Value: Other Not Done Uninterpretable Abnormal, Pathogenic Abnormal Normal
CYTO015	FISH Nomenclature Results	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: FISH Nomenclature Results Pick List Value:
CYTO016	FISH TextResults	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: FISH TextResults Pick List Value:
CYTO017	Date of FISH report	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Date of FISH report Pick List Value:
CYTO018	Array Normal/Abnormal	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Array Normal/Abnormal Pick List Value: Not Done Abnormal, Variant of unknown significance Normal Abnormal, Likely Pathogenic Abnormal, Benign Abnormal, Pathogenic Abnormal, Likely Benign Other
CYTO019	Array Nomenclature Results	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Array Nomenclature Results Pick List Value:
CYTO020	Array Text Results	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Array Text Results Pick List Value:
CYTO021	Date of array report	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: Date of array report Pick List Value:
CYTO022	GA at Sample Collection	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: GA at Sample Collection provided with maternal lab data Pick List Value:
CYTO023	Clinical Indication	Cytogenetics
This variable is available for release but with restriction or approval from appropriate stakeholder. Data Definition: The reason that cytogenetics investigations were ordered. Free-text provided by labs Pick List Value:
CYTO4467	EDB estimated by tissue flag	Cytogenetics
Data Definition: EDB estimated by tissue flag Pick List Value:
F0001	Estimated Date of Birth (EDB)	Antenatal General, Labour & Birth Mother, NIPT, PSP Screen, HBHC Child, Cytogenetics
This data element is available for request but because it's a quasi-identifier it can make the individual more unique in the population and hence easier to re-identify especially in combination with other variables. Categories/generalization and/or suppression might be necessary. Data Definition: Best estimate of date of birth determined by ultrasound or mathematical calculation using Nägele's rule. Same as EDC and EDD. EDB is the preferred term. Pick List Value:

Cytogenetics

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